Yellow Fever Virus phylogeographic tree — yfv

A treedata object containing the maximum clade credibility (MCC) tree from a BEAST relaxed random walk (RRW) continuous phylogeographic analysis of Yellow Fever Virus sequences in South America.

yfv_tree

Format

A treedata object with phylogeographic annotations including:

location1: Latitude coordinate
location2: Longitude coordinate
height_mean: Mean node height (time before present)
height_median: Median node height
location1_0.80HPD: 80 percent HPD intervals for latitude
location2_0.80HPD: 80 percent HPD intervals for longitude

Source

BEAST phylogeographic analysis with relaxed random walk model

Examples

if (FALSE) { # \dontrun{
data(yfv_tree)
autoplot(yfv_tree)
} # }